Merge pull request #1327 from biolink/remove_infores_import

Remove infores import

Author: sierra-moxon

.github/workflows/pypi-publish.yaml

@@ -1,8 +1,8 @@
 name: Publish Python Package
 
 on:
-  release:
-    types: [created]
+  push:
+    branches: [no_branch_here]
 
 jobs:
   build-n-publish:

ChangeLog

@@ -1,5 +1,13 @@
 CHANGES
 =======
+3.4.2
+----
+move GeneToPhenotypeAssociation to GeneToPhenotypicFeatureAssociation
+
+3.4.1
+-----
+recreate wheel with pydantic included
+
 3.4.0
 -----
 remove support for dynamic enumerations in anatomical context qualifier

biolink-model.yaml

@@ -6,7 +6,7 @@ license: https://creativecommons.org/publicdomain/zero/1.0/
 
 # Version should be kept in sync with primary Git repository release tag
 
-version: 3.4.0
+version: 3.4.2
 
 
 ## ------------
@@ -203,7 +203,6 @@ subsets:
 
 imports:
   - linkml:types
-  - information-resource
 
 types:
 
@@ -527,7 +526,6 @@ slots:
     in_subset:
       - translator_minimal
 
-
   publication type:
     slot_uri: dct:type
     description: >-
@@ -9864,7 +9862,7 @@ classes:
       - for use in describing the affect that the loss of function of a gene can have on exacerbating or ameliorating a symptom/phenotype
       - if the relationship of the statement using this predicate is statistical in nature, please use `associated with likelihood` or one of its children.
 
-  gene to phenotype association:
+  gene to phenotypic feature association:
     is_a: gene to disease or phenotypic feature association
     exact_mappings:
       - WBVocab:Gene-Phenotype-Association

biolink/model.py

@@ -1,5 +1,5 @@
 # Auto generated from biolink-model.yaml by pythongen.py version: 0.9.0
-# Generation date: 2023-05-23T23:23:30
+# Generation date: 2023-05-23T17:37:18
 # Schema: Biolink-Model
 #
 # id: https://w3id.org/biolink/biolink-model
@@ -25,7 +25,7 @@
 from linkml_runtime.utils.metamodelcore import Bool, URIorCURIE, XSDDate, XSDTime
 
 metamodel_version = "1.7.0"
-version = "3.4.0"
+version = "3.4.2"
 
 # Overwrite dataclasses _init_fn to add **kwargs in __init__
 dataclasses._init_fn = dataclasses_init_fn_with_kwargs

biolink/pydanticmodel.py

@@ -1,7 +1,7 @@
 [metadata]
 name = biolink_model
 description = 'A high level datamodel of biological entities and associations'
-version = 3.4.0
+version = 3.4.2
 
 url = https://github.com/biolink/biolink-model
 author = Harold Solbrig

setup.cfg

@@ -6,7 +6,7 @@
     REQUIREMENTS = FH.readlines()
 
 NAME = 'biolink-model'
-VERSION = '3.4.0'
+VERSION = '3.4.2'
 
 DESCRIPTION = 'Biolink Model: A high level datamodel of biological entities and associations'
 URL = 'https://github.com/biolink/biolink-model'