Skip to content

Commit 509b933

Browse files
Update readcounts.rst
1 parent 839a061 commit 509b933

File tree

1 file changed

+1
-1
lines changed

1 file changed

+1
-1
lines changed

docs/pvacseq/input_file_prep/readcounts.rst

+1-1
Original file line numberDiff line numberDiff line change
@@ -134,7 +134,7 @@ from a VCF and run bam-readcount. Information on that Docker container can be fo
134134
.. code-block:: none
135135
136136
/usr/bin/python /usr/bin/bam_readcount_helper.py \
137-
<decomposed_vcf> <sample_name> <reference_fasta> <bam_file> <output_dir>
137+
<decomposed_vcf> <sample_name> <reference_fasta> <bam_file> NOPREFIX <output_dir>
138138
139139
This will write two bam-readcount files to the ``<output_dir>``:
140140
``<sample_name>_bam_readcount_snv.tsv`` and

0 commit comments

Comments
 (0)