Fix bug in CICD (#971)

* Update install_dependencies.sh

* Update install_dependencies.sh

* Update README.rst

* Update index.rst

* Update index.rst

* Update index.rst

Author: timtreis

.scripts/ci/install_dependencies.sh

@@ -6,11 +6,11 @@ if [[ "$OS" == "ubuntu-latest" ]]; then
     echo "Installing APT dependencies"
 
     sudo apt-get update -y
-    sudo apt-get install automake -y  # leidenalg
+    sudo apt-get install automake -y
 
     # PyQt5 related
     sudo apt install libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xfixes0 -y
     sudo Xvfb :42 -screen 0 1920x1080x24 -ac +extension GLX </dev/null &
 elif [[ "$OS" == "macos-latest" ]]; then
-    brew install automake  # leidenalg
+    brew install automake
 fi

README.rst

@@ -92,11 +92,8 @@ We are happy about any contributions! Before you start, check out our `contribut
 Squidpy is part of the scverse® project (`website`_, `governance`_) and is fiscally sponsored by `NumFOCUS`_.
 Please consider making a tax-deductible `donation`_ to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.
 
-.. raw:: html
-
-   <p align="center">
-       <a href="https://numfocus.org/project/scverse">
-           <img src="https://raw.githubusercontent.com/numfocus/templates/master/images/numfocus-logo.png" width="200">
-       </a>
-   </p>
+.. image:: https://raw.githubusercontent.com/numfocus/templates/master/images/numfocus-logo.png
+   :width: 200
+   :target: https://numfocus.org/project/scverse
+   :align: center
 

docs/index.rst

@@ -32,17 +32,15 @@ tissue images if available.
 Squidpy is part of the scverse® project (`website`_, `governance`_) and is fiscally sponsored by `NumFOCUS`_.
 Please consider making a tax-deductible `donation`_ to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.
 
-.. raw:: html
-
-   <p align="center">
-       <a href="https://numfocus.org/project/scverse">
-           <img src="https://raw.githubusercontent.com/numfocus/templates/master/images/numfocus-logo.png" width="200">
-       </a>
-   </p>
+.. image:: https://raw.githubusercontent.com/numfocus/templates/master/images/numfocus-logo.png
+   :width: 200
+   :target: https://numfocus.org/project/scverse
+   :align: center
 
 Manuscript
 ----------
 .. _Palla, Spitzer et al. (2022): https://doi.org/10.1038/s41592-021-01358-2
+
 Please see our manuscript `Palla, Spitzer et al. (2022)`_ in **Nature Methods** to learn more.
 
 Squidpy's key applications
@@ -114,4 +112,5 @@ We are happy about any contributions! Before you start, check out our `contribut
 .. _skimage: https://scikit-image.org/
 .. _contributing guide: https://github.com/scverse/squidpy/blob/main/CONTRIBUTING.rst
 .. _discourse: https://discourse.scverse.org/
+
 .. _github: https://github.com/scverse/squidpy