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No outputfile and Killed #796

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Wannafly2024 opened this issue Mar 16, 2025 · 0 comments
Open

No outputfile and Killed #796

Wannafly2024 opened this issue Mar 16, 2025 · 0 comments

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@Wannafly2024
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When I attempted to assemble the genome using only HiFi data, the task was terminated unexpectedly without generating any output files. I am unsure where the issue lies.

I have two input files in fq.gz format, with sizes of 46 GB and 44 GB respectively. When submitting the task, I requested 200 GB of memory. However, I am uncertain how much memory hifiasm actually utilized during the process. Below are the commands I used and the corresponding log files. Could you please help me identify the problem?

hifiasm -o Ague.asm -t 24 -D 50 -N 500 --primary Ague_s1.fq.gz Ague_s4.fq.gz

logfile.txt

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