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494 Open 264 Closed
494 Open 264 Closed
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Issues list

min ul length and inverted region
#817 opened May 7, 2025 by EugeneKim76
1
great amount memory consumption inscreased
#816 opened May 5, 2025 by Alipha-Clisa
1
Is it possible to use ultra long(in --ont)+hifi+trio for hybrid assembly?
#815 opened May 4, 2025 by HaxyMoly
4
ONT or UL mode for ultralong reads
#814 opened Apr 30, 2025 by bilibilij
1
I currently have the contigs.fasta file assembled by other software. Can I input it into hifiasm for further assembly？
#813 opened Apr 29, 2025 by cz-csu
1
Trio binning assembly with parental hifi reads
#812 opened Apr 29, 2025 by walt676
Taking up a lot of memory
#811 opened Apr 28, 2025 by HaxyMoly
1
ONT data model result.
#810 opened Apr 27, 2025 by zhidaobuzhidao
6
Large genome result with the ultra-long data model
#809 opened Apr 25, 2025 by ld9866
7
Is Pore-C data available?
#807 opened Apr 22, 2025 by shin0727
2
heavy imbalance between the haplotypes
#806 opened Apr 17, 2025 by ucsfpan
1
Stuck at generating *udix.bin, when assembling polyploid genome with HiFi+ONT+Hi-C
#805 opened Mar 31, 2025 by abczhangshuo
2
Builld failure with version 0.25 under archlinux
#804 opened Mar 29, 2025 by kbipinkumar
1
"Segmentation fault" when writing reads to disk
#803 opened Mar 29, 2025 by flixitt
4
--ul or --ont?
#802 opened Mar 25, 2025 by shelkmike
How to define the k-mer value of the highest peak and the k-mer value of the second highest peak?
#801 opened Mar 25, 2025 by casusr
[hifiasm_0.25.0-r726] Single k-mer peak (16X) contradicts high heterozygosity ratio (289:1) in assembly
#800 opened Mar 21, 2025 by darkxin12
4
How can I improve a set partially phased assemblies that produce too many phase switches?
#799 opened Mar 20, 2025 by cahuparo
Segmentation Fault
#798 opened Mar 19, 2025 by mellamosummer
5
Duplications in assemblies generated using the hifiasm --dual mode
#797 opened Mar 17, 2025 by maggiesudo
No outputfile and Killed
#796 opened Mar 16, 2025 by Wannafly2024
Generating corrected ONT read from ONT only assembly
#794 opened Mar 13, 2025 by sadikmz
1
Abnormal kmer distribution, ERROR-purge, and haplotig size imbalance during plant genome assembly
#793 opened Mar 11, 2025 by Wugch2024
2
Regarding the issue of redundancy
#792 opened Mar 10, 2025 by casusr
1
What are the reasons that may cause the gap 'Ns' in hap.p_ctg?
#791 opened Mar 10, 2025 by walt676
4
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