This is a pipeline to identify SNPs with NGSEP using genotype by sequencing (GBS)
Perea, C., De La Hoz, J.F., Cruz, D.F., Lobaton, J.D., Izquierdo, P. et al. Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP. BMC Genomics 17, 498 (2016). https://doi.org/10.1186/s12864-016-2827-7