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Remove package networks #14

Remove package networks

Remove package networks #14

Triggered via pull request February 27, 2025 13:22
Status Failure
Total duration 1h 25m 36s
Artifacts 5

check-standard.yaml

on: pull_request
Matrix: check-standard
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50 errors and 42 warnings
macos-latest (release)
cannot read from connection
macos-latest (release)
The total size of the 19 globals exported for future expression (‘FUN()’) is 2.81 GiB.. This exceeds the maximum allowed size of 500.00 MiB (option 'future.globals.maxSize'). The three largest globals are ‘FUN’ (2.54 GiB of class ‘function’), ‘raw_umi’ (272.22 MiB of class ‘S4’) and ‘model_pars_fit’ (1.72 MiB of class ‘list’)
macos-latest (release)
there is no package called ‘DiagrammeRsvg’
macos-latest (release)
trying to use CRAN without setting a mirror
macos-latest (release)
ligands must be a list object
macos-latest (release)
cannot read from connection
macos-latest (release)
there is no package called ‘nsga2R’
macos-latest (release)
cannot read from connection
macos-latest (release)
cannot read from connection
macos-latest (release)
cannot read from connection
windows-latest (release)
cannot read from connection
windows-latest (release)
The total size of the 19 globals exported for future expression ('FUN()') is 2.81 GiB.. This exceeds the maximum allowed size of 500.00 MiB (option 'future.globals.maxSize'). The three largest globals are 'FUN' (2.54 GiB of class 'function'), 'raw_umi' (272.22 MiB of class 'S4') and 'model_pars_fit' (1.72 MiB of class 'list')
windows-latest (release)
cannot read from connection
windows-latest (release)
cannot read from connection
windows-latest (release)
there is no package called 'DiagrammeRsvg'
windows-latest (release)
ligands must be a list object
windows-latest (release)
trying to use CRAN without setting a mirror
windows-latest (release)
cannot read from connection
windows-latest (release)
there is no package called 'nsga2R'
windows-latest (release)
cannot read from connection
ubuntu-latest (oldrel-1)
cannot read from connection
ubuntu-latest (oldrel-1)
cannot read from connection
ubuntu-latest (oldrel-1)
cannot read from connection
ubuntu-latest (oldrel-1)
there is no package called ‘DiagrammeRsvg’
ubuntu-latest (oldrel-1)
ligands must be a list object
ubuntu-latest (oldrel-1)
trying to use CRAN without setting a mirror
ubuntu-latest (oldrel-1)
Can't select columns that don't exist.
ubuntu-latest (oldrel-1)
there is no package called ‘nsga2R’
ubuntu-latest (oldrel-1)
cannot read from connection
ubuntu-latest (oldrel-1)
R CMD check found ERRORs
ubuntu-latest (release)
cannot read from connection
ubuntu-latest (release)
cannot read from connection
ubuntu-latest (release)
cannot read from connection
ubuntu-latest (release)
there is no package called ‘DiagrammeRsvg’
ubuntu-latest (release)
ligands must be a list object
ubuntu-latest (release)
trying to use CRAN without setting a mirror
ubuntu-latest (release)
Can't select columns that don't exist.
ubuntu-latest (release)
there is no package called ‘nsga2R’
ubuntu-latest (release)
cannot read from connection
ubuntu-latest (release)
cannot read from connection
ubuntu-latest (devel)
cannot read from connection
ubuntu-latest (devel)
cannot read from connection
ubuntu-latest (devel)
cannot read from connection
ubuntu-latest (devel)
cannot read from connection
ubuntu-latest (devel)
cannot read from connection
ubuntu-latest (devel)
there is no package called ‘DiagrammeRsvg’
ubuntu-latest (devel)
ligands must be a list object
ubuntu-latest (devel)
trying to use CRAN without setting a mirror
ubuntu-latest (devel)
Can't select columns that don't exist.
ubuntu-latest (devel)
there is no package called ‘nsga2R’
macos-latest (release)
'::' or ':::' imports not declared from:
macos-latest (release)
get_expressed_genes:
macos-latest (release)
Missing link or links in Rd file 'get_ligand_target_links_oi.Rd':
macos-latest (release)
Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:
macos-latest (release)
Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':
macos-latest (release)
LazyData DB of 5.6 MB without LazyDataCompression set
macos-latest (release)
Files in the 'vignettes' directory but no files in 'inst/doc':
macos-latest (release)
Directory 'inst/doc' does not exist.
macos-latest (release)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macos-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
windows-latest (release)
'::' or ':::' imports not declared from:
windows-latest (release)
get_expressed_genes:
windows-latest (release)
Missing link or links in Rd file 'get_ligand_target_links_oi.Rd':
windows-latest (release)
Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:
windows-latest (release)
Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':
windows-latest (release)
LazyData DB of 5.3 MB without LazyDataCompression set
windows-latest (release)
Files in the 'vignettes' directory but no files in 'inst/doc':
windows-latest (release)
Directory 'inst/doc' does not exist.
ubuntu-latest (oldrel-1)
'::' or ':::' imports not declared from:
ubuntu-latest (oldrel-1)
get_expressed_genes:
ubuntu-latest (oldrel-1)
Missing link or links in documentation object 'get_ligand_target_links_oi.Rd':
ubuntu-latest (oldrel-1)
Functions or methods with usage in documentation object 'get_optimized_parameters_nsga2r' but not in code:
ubuntu-latest (oldrel-1)
Documented arguments not in \usage in documentation object 'get_lfc_celltype':
ubuntu-latest (oldrel-1)
LazyData DB of 5.6 MB without LazyDataCompression set
ubuntu-latest (oldrel-1)
Files in the 'vignettes' directory but no files in 'inst/doc':
ubuntu-latest (oldrel-1)
Directory 'inst/doc' does not exist.
ubuntu-latest (release)
'::' or ':::' imports not declared from:
ubuntu-latest (release)
get_expressed_genes:
ubuntu-latest (release)
Missing link or links in Rd file 'get_ligand_target_links_oi.Rd':
ubuntu-latest (release)
Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:
ubuntu-latest (release)
Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':
ubuntu-latest (release)
LazyData DB of 5.3 MB without LazyDataCompression set
ubuntu-latest (release)
Files in the 'vignettes' directory but no files in 'inst/doc':
ubuntu-latest (release)
Directory 'inst/doc' does not exist.
ubuntu-latest (devel)
'::' or ':::' imports not declared from:
ubuntu-latest (devel)
get_expressed_genes:
ubuntu-latest (devel)
Missing link(s) in Rd file 'get_ligand_target_links_oi.Rd':
ubuntu-latest (devel)
Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:
ubuntu-latest (devel)
Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':
ubuntu-latest (devel)
LazyData DB of 5.3 MB without LazyDataCompression set
ubuntu-latest (devel)
Files in the 'vignettes' directory but no files in 'inst/doc':
ubuntu-latest (devel)
Directory 'inst/doc' does not exist.

Artifacts

Produced during runtime
Name Size Digest
Linux-X64-rdevel-2-results
42.6 MB
sha256:955a909b9ca69b650c803476c8c4294043eeee04b6e126769d9284e49048e2e6
Linux-X64-roldrel-1-4-results
43 MB
sha256:0708e6ce4c0395d6281a6b00e5960a2f748c78cc338d25b6e7ea26f8d1407717
Linux-X64-rrelease-3-results
42.6 MB
sha256:793e48e53af1171bc64033b1d61ab9efa29cd3bf2657d0864736fdbd63e52eb4
Windows-X64-rrelease-1-results
42.6 MB
sha256:c9c1e999df6168ffd6d7e21d9b646731856eb281fecb3e3246a9bba443e17749
macOS-ARM64-rrelease-0-results
43 MB
sha256:396ab1656ff057398904b4e4c272482f7c5048b170d348f501a54cef5423c811