Process completed with exit code 1.

Test failures

R CMD check found ERRORs

there is no package called ‘nsga2R’

cannot read from connection

trying to use CRAN without setting a mirror

there is no package called ‘DiagrammeRsvg’

cannot read from connection

The total size of the 19 globals exported for future expression (‘FUN()’) is 2.81 GiB. This exceeds the maximum allowed size 500.00 MiB per by R option "future.globals.maxSize". This limit is set to protect against transfering too large objects to parallel workers by mistake, which may not be intended and could be costly. See help("future.globals.maxSize", package = "future") for further explainations and how to adjust or remove this threshold The three largest globals are ‘FUN’ (2.54 GiB of class ‘function’), ‘raw_umi’ (272.22 MiB of class ‘S4’) and ‘model_pars_fit’ (1.72 MiB of class ‘list’)

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

there is no package called 'nsga2R'

Can't select columns that don't exist.

trying to use CRAN without setting a mirror

there is no package called 'DiagrammeRsvg'

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

there is no package called ‘nsga2R’

Can't select columns that don't exist.

trying to use CRAN without setting a mirror

there is no package called ‘DiagrammeRsvg’

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

there is no package called ‘nsga2R’

Can't select columns that don't exist.

trying to use CRAN without setting a mirror

there is no package called ‘DiagrammeRsvg’

cannot read from connection

The total size of the 19 globals exported for future expression (‘FUN()’) is 2.84 GiB. This exceeds the maximum allowed size 500.00 MiB per by R option "future.globals.maxSize". This limit is set to protect against transfering too large objects to parallel workers by mistake, which may not be intended and could be costly. See help("future.globals.maxSize", package = "future") for further explainations and how to adjust or remove this threshold The three largest globals are ‘FUN’ (2.54 GiB of class ‘function’), ‘raw_umi’ (272.22 MiB of class ‘S4’) and ‘as.matrix’ (27.98 MiB of class ‘function’)

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

there is no package called ‘nsga2R’

Can't select columns that don't exist.

trying to use CRAN without setting a mirror

cannot read from connection

cannot read from connection

cannot read from connection

cannot read from connection

Assay RNA changing from Assay to Assay

The `slot` argument of `GetAssayData()` is deprecated as of SeuratObject 5.0.0.

Directory 'inst/doc' does not exist.

Files in the 'vignettes' directory but no files in 'inst/doc':

LazyData DB of 5.3 MB without LazyDataCompression set

Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':

Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:

Missing link(s) in Rd file 'get_ligand_target_links_oi.Rd':

get_expressed_genes:

'::' or ':::' imports not declared from:

DimReduc cca changing from DimReduc to DimReduc

Assay RNA changing from Assay to Assay

Directory 'inst/doc' does not exist.

Files in the 'vignettes' directory but no files in 'inst/doc':

LazyData DB of 5.3 MB without LazyDataCompression set

Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':

Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:

Missing link(s) in Rd file 'get_ligand_target_links_oi.Rd':

get_expressed_genes:

'::' or ':::' imports not declared from:

DimReduc cca changing from DimReduc to DimReduc

Assay RNA changing from Assay to Assay

Directory 'inst/doc' does not exist.

Files in the 'vignettes' directory but no files in 'inst/doc':

LazyData DB of 5.3 MB without LazyDataCompression set

Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':

Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:

Missing link(s) in Rd file 'get_ligand_target_links_oi.Rd':

get_expressed_genes:

'::' or ':::' imports not declared from:

Assay RNA changing from Assay to Assay

The `slot` argument of `GetAssayData()` is deprecated as of SeuratObject 5.0.0.

Directory 'inst/doc' does not exist.

Files in the 'vignettes' directory but no files in 'inst/doc':

LazyData DB of 5.3 MB without LazyDataCompression set

Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':

Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:

Missing link or links in Rd file 'get_ligand_target_links_oi.Rd':

get_expressed_genes:

'::' or ':::' imports not declared from:

DimReduc cca changing from DimReduc to DimReduc

Assay RNA changing from Assay to Assay

Directory 'inst/doc' does not exist.

Files in the 'vignettes' directory but no files in 'inst/doc':

LazyData DB of 5.3 MB without LazyDataCompression set

Documented arguments not in \usage in Rd file 'get_lfc_celltype.Rd':

Functions or methods with usage in Rd file 'get_optimized_parameters_nsga2r.Rd' but not in code:

Missing link(s) in Rd file 'get_ligand_target_links_oi.Rd':

get_expressed_genes: