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Issues: ncats/translator-workflows

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Issues list

Replace MyGene API with BioThings client in WF2
#76 opened May 22, 2019 by kennethbruskiewicz
@kennethbruskiewicz
1
review WF2 module parameters and parameter exposure through API
#71 opened May 10, 2019 by realmarcin
Use WF2 summary report module on multiple outputs from CWL WF2 script run with input variation
#70 opened May 9, 2019 by realmarcin
Use CWL WF2 script and generate output using variations on input (diseases, gene sets)
#69 opened May 9, 2019 by realmarcin
Create new WF2 module to compute summary report (eg average ranks) for multiple outputs from WF2 standalone script run with input variation
#68 opened May 9, 2019 by realmarcin
Use WF2 standalone script and generate output using variations on input (diseases, gene sets)
#67 opened May 9, 2019 by realmarcin
Take converted WF2 standalone python script and integrate with CWL to execute the workflow
#66 opened May 9, 2019 by realmarcin
Convert WF2 nb (batch disease version) to a standalone, monolithic python script
#65 opened May 9, 2019 by realmarcin
Workflow 2 mvp-module-library
#64 opened May 8, 2019 by lhannest
Workflow 8 runtime error?
#60 opened Mar 1, 2019 by RichardBruskiewich
Workflow 3B Module 3: Pathophysiology & Symptomatology WF3B
#57 opened Jan 31, 2019 by karafecho
@cmungall @gregr
@webyrd @mwawer @dkoslicki @cbizon @MarkDWilliams @karafecho
Workflow 3B Module 2: Tissue & System Anatomy WF3B
#56 opened Jan 31, 2019 by karafecho
@cmungall @gregr
@webyrd @mwawer @dkoslicki @cbizon @MarkDWilliams @karafecho
Workflow 3B Module 1: Molecular & Cellular Physiology WF3B
#55 opened Jan 31, 2019 by karafecho
@cmungall @gregr
@webyrd @mwawer @dkoslicki @cbizon @MarkDWilliams @karafecho
1
Workflow 3B: MCATS Exam Questions WF3B
#54 opened Jan 31, 2019 by karafecho
@cmungall @gregr
@webyrd @mwawer @dkoslicki @cbizon @MarkDWilliams @karafecho
4
Workflow 9: identify dataset and service for tissue drug delivery
#53 opened Jan 23, 2019 by realmarcin
Workflow 9: identify dataset and service for transporter gene expression profiles across tissues
#52 opened Jan 23, 2019 by realmarcin
Workflow 9: identify gene variance in cell lines and source tissues (BigClam)
#51 opened Jan 23, 2019 by realmarcin
Workflow 9: identify dataset and service for tissue metastasis patterns ( lymph/blood vessel network?)
#50 opened Jan 23, 2019 by realmarcin
Workflow 9: identify dataset and service for tissue development tree
#49 opened Jan 23, 2019 by realmarcin
Workflow 9: identify dataset and service for tissue relative location and adjacency
#48 opened Jan 23, 2019 by realmarcin
Workflow 9: identify dataset and service for tissue properties (eg density)
#47 opened Jan 23, 2019 by realmarcin
Workflow 9: implement tissue enrichment module
#46 opened Jan 23, 2019 by realmarcin
Workflow 9: implement tissue/tissue set search (analogous to existing gene/gene set search)
#45 opened Jan 23, 2019 by realmarcin
Workflow 4: Green/Gamma Implementation of Modules 1-4 & 5-8
#44 opened Jan 22, 2019 by karafecho
@stevencox @webyrd
@kennethmorton @xu-hao @dkoslicki @cbizon @karafecho @richard1933 @CaseyTa @qianzhu2018
6
Workflow 5: Red Team Implementation of Modules 1-4 Workflow 5
#43 opened Jan 7, 2019 by karafecho
@karafecho @ChunhuaWeng
@CaseyTa @qianzhu2018
2
ProTip! Exclude everything labeled bug with -label:bug.