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@satijalab

satijalab

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  1. seurat seurat Public

    R toolkit for single cell genomics

    R 2.4k 946

  2. azimuth azimuth Public

    A Shiny web app for mapping datasets using Seurat v4

    HTML 126 35

  3. seurat-wrappers seurat-wrappers Public

    Community-provided extensions to Seurat

    R 330 135

  4. seurat-data seurat-data Public

    Dataset distribution for Seurat

    R 137 46

Repositories

Showing 10 of 23 repositories
  • panhumanpy Public
    satijalab/panhumanpy’s past year of commit activity
    Python 11 0 0 1 Updated May 5, 2025
  • sctransform Public

    R package for modeling single cell UMI expression data using regularized negative binomial regression

    satijalab/sctransform’s past year of commit activity
    R 221 GPL-3.0 37 45 0 Updated May 1, 2025
  • seurat Public

    R toolkit for single cell genomics

    satijalab/seurat’s past year of commit activity
    R 2,426 946 447 27 Updated Apr 24, 2025
  • AzimuthAPI Public
    satijalab/AzimuthAPI’s past year of commit activity
    R 1 MIT 0 1 0 Updated Apr 24, 2025
  • seurat-object Public
    satijalab/seurat-object’s past year of commit activity
    R 27 30 45 4 Updated Apr 23, 2025
  • Mixscale Public
    satijalab/Mixscale’s past year of commit activity
    R 17 1 12 0 Updated Apr 21, 2025
  • seurat-data Public

    Dataset distribution for Seurat

    satijalab/seurat-data’s past year of commit activity
    R 137 GPL-3.0 46 37 1 Updated Mar 6, 2025
  • satijalab.r-universe.dev Public
    satijalab/satijalab.r-universe.dev’s past year of commit activity
    0 0 0 0 Updated Jan 7, 2025
  • seurat-docker Public

    Docker images of Seurat

    satijalab/seurat-docker’s past year of commit activity
    Dockerfile 8 8 3 0 Updated Dec 9, 2024
  • seurat-wrappers Public

    Community-provided extensions to Seurat

    satijalab/seurat-wrappers’s past year of commit activity
    R 330 GPL-3.0 135 87 14 Updated Nov 22, 2024
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